A number of Earthlings hitchhiked on ToeJam and Earl's spaceship on their trip back home after the first game, and are no infesting Funkotron. ToeJam and Earl must search out the Earthlings, capture them in large jars and ship them back to Earth in rocket ships.
It is also your funky mission to find ten beloved objects of Lamont the Funkapotamus, the source of all funk in the universe, to persuade him to return to the planet of Funkotron. Use your funk powers to assist in evading and capturing the Earthlings, such as the Funk Move and Funk Sca.